Source code for pyrfu.mms.db_get_ts

#!/usr/bin/env python
# -*- coding: utf-8 -*-

# Built-in imports
import json
import logging
from typing import Mapping, Optional, Tuple

# 3rd party imports
from xarray.core.dataarray import DataArray

from pyrfu.mms.db_init import MMS_CFG_PATH
from pyrfu.mms.get_data import (
    _check_times,
    _get_file_content_sources,
    _list_files_sources,
)
from pyrfu.mms.get_ts import get_ts

# Local imports
from pyrfu.pyrf.ts_append import ts_append

__author__ = "Louis Richard"
__email__ = "louisr@irfu.se"
__copyright__ = "Copyright 2020-2024"
__license__ = "MIT"
__version__ = "2.4.13"
__status__ = "Prototype"

logging.captureWarnings(True)
logging.basicConfig(
    format="[%(asctime)s] %(levelname)s: %(message)s",
    datefmt="%d-%b-%y %H:%M:%S",
    level=logging.INFO,
)


def _tokenize(dataset_name: str) -> Tuple[str, Mapping[str, str]]:
    r"""Tokenize dataset name.

    Parameters
    ----------
    dataset_name : str
        Name of the dataset.

    Returns
    -------
    str
        MMS spacecraft identifier.
    dict
        Dictionary containing the instrument, telemetry mode, level, and data type.

    """
    dataset = dataset_name.split("_")

    # Index of the MMS spacecraft
    probe = dataset[0][-1]

    var = {"inst": dataset[1], "tmmode": dataset[2], "lev": dataset[3]}

    try:
        var["dtype"] = dataset[4]
    except IndexError:
        pass

    return probe, var


[docs]def db_get_ts( dataset_name: str, cdf_name: str, tint: list[str], verbose: Optional[bool] = True, data_path: Optional[str] = "", source: Optional[str] = "default", ) -> DataArray: r"""Get variable time series in the cdf file. Parameters ---------- dataset_name : str Name of the dataset. cdf_name : str Name of the target field in cdf file. tint : list Time interval. verbose : bool, Optional Status monitoring. Default is verbose = True data_path : str, Optional Path of MMS data. Default uses `pyrfu.mms.mms_config.py` source: str, Optional Resource to fetch data from: {"default", "local", "sdc", "aws"}. Default uses default in `pyrfu/mms/config.json` Returns ------- DataArray Time series of the target variable. Raises ------ FileNotFoundError If no files are found for the dataset name. """ mms_id, var = _tokenize(dataset_name) # Read the current version of the MMS configuration file with open(MMS_CFG_PATH, "r", encoding="utf-8") as fs: config = json.load(fs) if not source or source == "default": resource = config.get("default") elif source.lower() in ["local", "sdc", "aws"]: resource = source else: raise ValueError( "Invalid source. Must be one of 'default', 'local', 'sdc', 'aws'" ) file_names, sdc_session, headers = _list_files_sources( resource, tint, mms_id, var, data_path ) if file_names: if verbose: logging.info("Loading %s...", cdf_name) for i, file_name in enumerate(file_names): file_content = _get_file_content_sources( resource, file_name, sdc_session, headers ) out = get_ts(file_content, cdf_name, tint) if i == 0: out_all = out else: out_all = ts_append(out_all, out) out_all = _check_times(out_all) else: raise FileNotFoundError(f"No files found for {dataset_name}") if sdc_session: sdc_session.close() return out_all